Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio ruminis
Accession NumberPDYH00000000.1
Gene Summary
Adenine Count
886960 bp
Thymine Count
912208 bp
Guanine Count
548976 bp
Cytosine Count
584621 bp
Genome Length
2932765 bp
Protein-coding Genes
2628 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | CSX00_05100 | Not Available | - | 1129326 - 1130546 | 45911.0 |
| Trna-cys | Not Available | Not Available | + | 1130707 - 1130780 | Not Available |
| Trna-ser | Not Available | Not Available | + | 1130798 - 1130885 | Not Available |
| peptide abc transporter substrate-binding protein | CSX00_05115 | Not Available | - | 1131007 - 1132746 | 63934.9 |
| peptide abc transporter atp-binding protein | CSX00_05120 | Not Available | - | 1132803 - 1133783 | 36717.4 |
| peptide abc transporter atp-binding protein | CSX00_05125 | Not Available | - | 1133785 - 1134786 | 36915.9 |
| peptide abc transporter permease | CSX00_05130 | Not Available | - | 1134800 - 1135885 | 39793.6 |
| peptide abc transporter permease | CSX00_05135 | Not Available | - | 1135896 - 1136807 | 33460.1 |
| fumarate hydratase | CSX00_05140 | Not Available | - | 1136872 - 1137423 | 20043.2 |
| fumarate hydratase | CSX00_05145 | Not Available | - | 1137423 - 1138265 | 30238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.