Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | VSVS12_RS18140 | P06184 | + | 730455 - 731717 | 47856.3 |
| hypothetical protein | VSVS12_RS18145 | Not Available | - | 731771 - 731956 | 7162.13 |
| fatty acid cis/trans isomerase | VSVS12_RS18150 | Not Available | - | 731995 - 734352 | 90511.8 |
| sugar efflux transporter | VSVS12_RS18155 | Q9RUR0 | - | 734477 - 735676 | 43166.9 |
| siderophore abc transporter substrate-binding protein | VSVS12_RS18160 | P11460 | - | 735890 - 736795 | 33327.8 |
| tonb-dependent receptor domain-containing protein | VSVS12_RS18165 | Not Available | - | 736809 - 738725 | 70725.5 |
| sensor histidine kinase | VSVS12_RS18170 | Q04804 | - | 738964 - 740298 | 50621.9 |
| response regulator transcription factor | VSVS12_RS18175 | Q04803 | - | 740295 - 741053 | 28534.3 |
| ygiw/ydei family stress tolerance ob fold protein | VSVS12_RS18180 | P0ADU6 | - | 741229 - 741567 | 12186.4 |
| acfa family outer membrane beta-barrel protein | VSVS12_RS18185 | Not Available | - | 741628 - 742275 | 23741.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
