Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | VSVS12_RS17700 | Not Available | + | 613509 - 614465 | 35057.0 |
| duf333 domain-containing protein | VSVS12_RS17705 | Not Available | - | 614482 - 614760 | 10208.9 |
| ggdef domain-containing protein | VSVS12_RS17710 | Q9KKZ4 | - | 614854 - 615870 | 38463.6 |
| chemotaxis protein | VSVS12_RS17715 | O25154 | - | 616100 - 617026 | 34261.6 |
| peptidylprolyl isomerase ppic | VSVS12_RS17720 | P0A9L7 | + | 617218 - 617496 | 10228.6 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | VSVS12_RS17725 | P0ACV1 | - | 617582 - 618514 | 35413.9 |
| cytochrome c | VSVS12_RS17730 | P00106 | - | 618630 - 618950 | 11792.2 |
| low-specificity l-threonine aldolase | VSVS12_RS17735 | P75823 | - | 619103 - 620107 | 36134.1 |
| nudix hydrolase | VSVS12_RS17740 | Not Available | - | 620142 - 620672 | 19537.5 |
| atpase rava domain-containing protein | VSVS12_RS17745 | B1IWZ2 | + | 620933 - 622597 | 62676.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
