Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | VSVS12_RS01730 | Q3SEU8 | + | 367131 - 367886 | 27477.0 |
| pseudaminic acid cytidylyltransferase | VSVS12_RS01735 | Q0P8U6 | + | 367890 - 368579 | 25812.7 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | VSVS12_RS23560 | Not Available | + | 368583 - 369188 | 22648.3 |
| bifunctional udp-2,4-diacetamido-2,4,6-trideoxy-beta-l-altropyranose hydrolase/gnat family n-acetyltransferase | VSVS12_RS23565 | Not Available | + | 369185 - 370084 | 34011.7 |
| pseudaminic acid synthase | VSVS12_RS01745 | Q939J8 | + | 370092 - 371144 | 38717.1 |
| glycosyltransferase 52 family protein | VSVS12_RS01750 | Not Available | - | 371246 - 372256 | 39015.2 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | VSVS12_RS01755 | P44806 | - | 372290 - 373588 | 47707.2 |
| lipopolysaccharide heptosyltransferase ii | VSVS12_RS01760 | P37421 | - | 373582 - 374640 | 39143.4 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | VSVS12_RS01765 | P24205 | - | 374637 - 375629 | 38504.9 |
| adp-glyceromanno-heptose 6-epimerase | VSVS12_RS01770 | Q87T56 | - | 375648 - 376589 | 35219.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
