Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspj | VSVS12_RS01475 | P45776 | + | 315146 - 315817 | 25878.2 |
| type ii secretion system minor pseudopilin gspk | VSVS12_RS01480 | P45781 | + | 315807 - 316820 | 37288.9 |
| type ii secretion system protein gspl | VSVS12_RS01485 | P45782 | + | 316786 - 317997 | 44645.6 |
| type ii secretion system protein m | VSVS12_RS01490 | P41851 | + | 318008 - 318499 | 18712.9 |
| type ii secretion system protein n | VSVS12_RS01495 | P45784 | + | 318506 - 319267 | 27689.6 |
| two-component system sensor histidine kinase envz | VSVS12_RS01500 | P0AEJ4 | - | 319345 - 320649 | 48191.1 |
| two-component system response regulator ompr | VSVS12_RS01505 | P0AA18 | - | 320748 - 321467 | 27275.2 |
| transcription elongation factor greb | VSVS12_RS01510 | Q87TB8 | + | 321794 - 322282 | 19222.7 |
| carboxymuconolactone decarboxylase family protein | VSVS12_RS01515 | P96684 | - | 322390 - 322827 | 16266.9 |
| lysr family transcriptional regulator | VSVS12_RS01520 | P30864 | + | 322948 - 323880 | 34923.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
