Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | VSVS12_RS01230 | P18396 | - | 263179 - 264597 | 53707.2 |
| yihd family protein | VSVS12_RS01235 | P0ADQ1 | - | 264886 - 265152 | 10302.6 |
| hypothetical protein | VSVS12_RS23165 | Not Available | - | 265332 - 265499 | 6004.39 |
| sporulation protein | VSVS12_RS01240 | Not Available | + | 265911 - 266708 | 29981.6 |
| paqr family membrane homeostasis protein trha | VSVS12_RS01245 | P67155 | + | 266794 - 267447 | 23772.1 |
| trkh family potassium uptake protein | VSVS12_RS01250 | E1V6K4 | - | 267444 - 268889 | 52244.8 |
| trk system potassium transporter trka | VSVS12_RS01255 | P39448 | - | 268903 - 270279 | 50219.3 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | VSVS12_RS01260 | Q87KD3 | - | 270440 - 271720 | 47669.9 |
| methionyl-trna formyltransferase | VSVS12_RS01265 | A7N122 | - | 271860 - 272807 | 33998.7 |
| peptide deformylase | VSVS12_RS01270 | Q87KD5 | - | 272826 - 273335 | 19035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
