Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | VSVS12_RS01080 | A7N1D9 | - | 230094 - 231032 | 35719.4 |
| abc transporter substrate-binding protein | VSVS12_RS01085 | Q8Z863 | + | 231624 - 233297 | 62926.7 |
| hypothetical protein | VSVS12_RS01090 | Not Available | + | 233512 - 233772 | 9929.59 |
| sulfurtransferase tusa | VSVS12_RS01095 | Q87TP4 | - | 233831 - 234079 | 9367.4 |
| lysr family transcriptional regulator | VSVS12_RS01100 | A8ACM1 | + | 234565 - 235506 | 35464.2 |
| mdr family oxidoreductase | VSVS12_RS01105 | P26646 | - | 235621 - 236601 | 34758.0 |
| threonine ammonia-lyase, biosynthetic | VSVS12_RS01110 | P20506 | - | 236815 - 238377 | 57065.4 |
| dihydroxy-acid dehydratase | VSVS12_RS01115 | Q5E1P2 | - | 238381 - 240222 | 65465.4 |
| branched-chain amino acid transaminase | VSVS12_RS01120 | P0AB82 | - | 240238 - 241182 | 34312.9 |
| acetolactate synthase 2 small subunit | VSVS12_RS01125 | Not Available | - | 241196 - 241480 | 10901.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
