Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 184661 - 184776 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 184869 - 187762 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 188059 - 189605 | Not Available |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | VSVS12_RS00900 | Q9L6L1 | - | 190117 - 190644 | 20429.8 |
| trkh family potassium uptake protein | VSVS12_RS00905 | Q87TN7 | - | 190654 - 192111 | 53068.8 |
| yigz family protein | VSVS12_RS00910 | P44842 | - | 192150 - 192773 | 22464.9 |
| fatty acid oxidation complex subunit alpha fadb | VSVS12_RS00915 | A7N1D2 | + | 192975 - 195146 | 78909.4 |
| acetyl-coa c-acyltransferase fada | VSVS12_RS00920 | Q87TP0 | + | 195159 - 196334 | 41473.3 |
| dna-binding transcriptional activator punr | VSVS12_RS00925 | P0ACR3 | - | 196381 - 197286 | 34361.5 |
| purine nucleoside transporter punc | VSVS12_RS00930 | P37597 | + | 197476 - 198681 | 42919.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
