Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transketolase | VSVS12_RS14005 | Q7MHK7 | - | 3099668 - 3101662 | 71699.6 |
| methionine adenosyltransferase | VSVS12_RS14010 | Q5E7R2 | + | 3101984 - 3103138 | 41898.9 |
| duf2189 domain-containing protein | VSVS12_RS14015 | Not Available | + | 3103496 - 3104293 | 29379.8 |
| sprt family zinc-dependent metalloprotease | VSVS12_RS14020 | Q87LK4 | + | 3104366 - 3104863 | 19028.1 |
| endonuclease | VSVS12_RS14025 | P08038 | + | 3104960 - 3105682 | 27749.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | VSVS12_RS14030 | P0AGL8 | + | 3105776 - 3106507 | 27301.0 |
| glutathione synthase | VSVS12_RS14035 | Q87LK1 | + | 3106520 - 3107467 | 34949.4 |
| yqge/algh family protein | VSVS12_RS14040 | Q8DCB0 | + | 3107552 - 3108115 | 20663.8 |
| holliday junction resolvase ruvx | VSVS12_RS14045 | Q7MHJ8 | + | 3108167 - 3108595 | 15715.7 |
| metalloprotease pmba | VSVS12_RS14050 | P0AFK1 | - | 3108726 - 3110069 | 48349.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
