Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi str. VS-12
Accession NumberNZ_CP016311.1
Gene Summary
Adenine Count
4089 bp
Thymine Count
4071 bp
Guanine Count
2982 bp
Cytosine Count
3430 bp
Genome Length
14572 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | VSVS12_RS06500 | P42620 | + | 1389469 - 1390413 | 36961.5 |
| tfp pilus assembly protein fimt/fimu | VSVS12_RS06505 | Not Available | + | 1390801 - 1391301 | 18279.8 |
| pili assembly chaperone | VSVS12_RS06510 | Not Available | + | 1391288 - 1391854 | 20672.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS06515 | Not Available | + | 1391854 - 1392702 | 31642.5 |
| msha biogenesis protein mshp | VSVS12_RS06520 | Not Available | + | 1392677 - 1393066 | 14349.3 |
| duf6701 domain-containing protein | VSVS12_RS06525 | Not Available | + | 1393063 - 1399956 | 252355.0 |
| tetr/acrr family transcriptional regulator | VSVS12_RS06530 | Not Available | - | 1400099 - 1400692 | 22574.0 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS12_RS06535 | C5BHN6 | + | 1400880 - 1401995 | 40374.5 |
| efflux rnd transporter permease subunit | VSVS12_RS06540 | O31501 | + | 1401995 - 1405045 | 111430.0 |
| ferredoxin-type protein napf | VSVS12_RS06545 | P44101 | - | 1405139 - 1405678 | 19299.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
