Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida str. JCM 20779
Accession NumberNZ_CP011924.1
Gene Summary
Adenine Count
1203506 bp
Thymine Count
1200014 bp
Guanine Count
928653 bp
Cytosine Count
921202 bp
Genome Length
4253475 bp
Protein-coding Genes
3631 genes
Non-Coding Genes
245 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PPIS_RS00895 | Not Available | - | 176806 - 177210 | 15914.2 |
| delta-class carbonic anhydrase | PPIS_RS00900 | Not Available | - | 177418 - 178197 | 28193.0 |
| Trna-met | Not Available | Not Available | + | 179284 - 179360 | Not Available |
| ribosome maturation factor rimp | PPIS_RS00910 | Not Available | + | 179631 - 180086 | 16821.1 |
| transcription termination factor nusa | PPIS_RS00915 | Not Available | + | 180126 - 181625 | 55650.8 |
| translation initiation factor if-2 | PPIS_RS00920 | Not Available | + | 181651 - 184338 | 98122.6 |
| 30s ribosome-binding factor rbfa | PPIS_RS00925 | Not Available | + | 184421 - 184825 | 15213.3 |
| trna pseudouridine(55) synthase trub | PPIS_RS00930 | Not Available | + | 184825 - 185772 | 34574.4 |
| 30s ribosomal protein s15 | PPIS_RS00935 | Not Available | + | 185880 - 186149 | 10075.2 |
| polyribonucleotide nucleotidyltransferase | PPIS_RS00940 | Not Available | + | 186374 - 188500 | 75920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.