Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida str. JCM 20779
Accession NumberNZ_CP011924.1
Gene Summary
Adenine Count
1203506 bp
Thymine Count
1200014 bp
Guanine Count
928653 bp
Cytosine Count
921202 bp
Genome Length
4253475 bp
Protein-coding Genes
3631 genes
Non-Coding Genes
245 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv-a pilus assembly atpase pilb | PPIS_RS00255 | Not Available | - | 27090 - 28766 | 62047.9 |
| dephospho-coa kinase | PPIS_RS00260 | Not Available | - | 28876 - 29505 | 22989.6 |
| prepilin peptidase | PPIS_RS00265 | Not Available | - | 29515 - 30393 | 32619.8 |
| type ii secretion system f family protein | PPIS_RS00270 | Not Available | - | 30527 - 31744 | 44592.1 |
| pilin | PPIS_RS00275 | Not Available | - | 31793 - 32233 | 15066.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | PPIS_RS00280 | Not Available | - | 32876 - 33718 | 30250.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | PPIS_RS00285 | Not Available | + | 35830 - 36372 | 20568.1 |
| beta-lactamase regulator ampe | PPIS_RS00290 | Not Available | + | 36379 - 37230 | 32611.0 |
| pilz domain-containing protein | PPIS_RS00295 | Not Available | - | 37303 - 39804 | 95902.1 |
| dna repair protein rada | PPIS_RS00300 | Not Available | + | 39933 - 41303 | 49002.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.