Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida str. DE1-A
Accession NumberNZ_CP031759.1
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | D0N37_RS02730 | Not Available | - | 588528 - 589364 | 30217.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | D0N37_RS02735 | Not Available | - | 589465 - 591051 | 57215.0 |
| dna-binding transcriptional regulator fis | D0N37_RS02740 | Not Available | - | 591263 - 591553 | 10994.3 |
| trna dihydrouridine synthase dusb | D0N37_RS02745 | Not Available | - | 591599 - 592564 | 35596.8 |
| 50s ribosomal protein l11 methyltransferase | D0N37_RS02750 | Not Available | - | 592868 - 593740 | 32143.2 |
| rna polymerase sigma factor rpod | D0N37_RS02755 | Not Available | - | 593815 - 595665 | 70363.4 |
| dna primase | D0N37_RS02760 | Not Available | - | 595787 - 597526 | 66081.2 |
| gatb/yqey domain-containing protein | D0N37_RS02765 | Not Available | - | 597704 - 598150 | 16129.6 |
| 30s ribosomal protein s21 | D0N37_RS02770 | Not Available | - | 598171 - 598386 | 8577.63 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | D0N37_RS02775 | Not Available | - | 598584 - 599168 | 21900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.