Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida str. DE1-A
Accession NumberNZ_CP031759.1
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf342 domain-containing protein | D0N37_RS15650 | Not Available | + | 3358424 - 3360043 | 58235.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D0N37_RS15655 | Not Available | - | 3360057 - 3360866 | 30210.9 |
| hypothetical protein | D0N37_RS15660 | Not Available | - | 3360898 - 3361383 | 18405.4 |
| manganese-dependent inorganic pyrophosphatase | D0N37_RS15665 | Not Available | + | 3361591 - 3362514 | 33604.7 |
| helix-turn-helix transcriptional regulator | D0N37_RS15670 | Not Available | + | 3362550 - 3363239 | 24990.4 |
| hypothetical protein | D0N37_RS15675 | Not Available | - | 3363255 - 3363554 | 11134.0 |
| transglutaminase-like domain-containing protein | D0N37_RS15680 | Not Available | + | 3363890 - 3364591 | 26720.9 |
| sensor domain-containing diguanylate cyclase | D0N37_RS15685 | Not Available | - | 3364644 - 3365687 | 39046.7 |
| pyridoxal-dependent aspartate 1-decarboxylase panp | D0N37_RS15690 | Not Available | - | 3365889 - 3367517 | 59842.4 |
| eal domain-containing protein | D0N37_RS15695 | Not Available | + | 3367989 - 3369911 | 72292.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.