Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SHEWBE_RS20355 | Not Available | - | 987692 - 987859 | 5958.02 |
| hypothetical protein | SHEWBE_RS20360 | Not Available | - | 987856 - 988038 | 6487.02 |
| hypothetical protein | SHEWBE_RS20365 | Not Available | - | 988107 - 988421 | 11426.9 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20765 | Not Available | - | 988408 - 989116 | 24573.5 |
| ompa family protein | SHEWBE_RS04580 | Not Available | + | 989387 - 990049 | 22900.3 |
| magnesium transporter | SHEWBE_RS04585 | Not Available | - | 990155 - 991516 | 49257.0 |
| hpr family phosphocarrier protein | SHEWBE_RS04590 | Not Available | - | 991623 - 991898 | 9461.56 |
| rnase adapter rapz | SHEWBE_RS04595 | Not Available | - | 991891 - 992739 | 32433.0 |
| pts iia-like nitrogen regulatory protein ptsn | SHEWBE_RS04600 | Not Available | - | 992736 - 993179 | 16116.6 |
| ribosome hibernation promoting factor | SHEWBE_RS04605 | Not Available | - | 993183 - 993470 | 11054.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
