Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS04510 | Not Available | - | 977227 - 977490 | 9888.99 |
| tyrosine-type recombinase/integrase | SHEWBE_RS04515 | Not Available | - | 977975 - 978151 | 6259.36 |
| hypothetical protein | SHEWBE_RS04520 | Not Available | + | 978335 - 978550 | 7908.43 |
| alkyl sulfatase dimerization domain-containing protein | SHEWBE_RS04525 | Not Available | + | 978693 - 979166 | 16959.7 |
| class ii fumarate hydratase | SHEWBE_RS04535 | Not Available | + | 979759 - 981138 | 48965.2 |
| phosphatase pap2 family protein | SHEWBE_RS04540 | Not Available | - | 981184 - 981996 | 29989.3 |
| class i sam-dependent rrna methyltransferase | SHEWBE_RS04545 | Not Available | - | 982393 - 983400 | 37310.6 |
| tyrosine-type recombinase/integrase | SHEWBE_RS04550 | Not Available | + | 983517 - 983855 | 12370.6 |
| omca/mtrc family decaheme c-type cytochrome | SHEWBE_RS04560 | Not Available | + | 984551 - 986779 | 80588.7 |
| hypothetical protein | SHEWBE_RS04565 | Not Available | + | 987160 - 987522 | 13753.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
