Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excalibur calcium-binding domain-containing protein | SHEWBE_RS04410 | Not Available | - | 956345 - 956941 | 21983.2 |
| serine hydrolase | SHEWBE_RS04415 | Not Available | - | 957211 - 957579 | 13123.1 |
| methyl-accepting chemotaxis protein | SHEWBE_RS04420 | Not Available | + | 957799 - 959337 | 56824.6 |
| duf2999 family protein | SHEWBE_RS04425 | Not Available | - | 959489 - 959740 | 8995.3 |
| hypothetical protein | SHEWBE_RS04430 | Not Available | - | 959929 - 960312 | 13963.1 |
| tyrosine-type recombinase/integrase | SHEWBE_RS04435 | Not Available | - | 960648 - 961036 | 13847.0 |
| phosphate abc transporter substrate-binding protein | SHEWBE_RS04440 | Not Available | - | 961323 - 961733 | 14394.8 |
| hypothetical protein | SHEWBE_RS04445 | Not Available | - | 961742 - 962836 | 40588.4 |
| methyl-accepting chemotaxis protein | SHEWBE_RS04450 | Not Available | - | 962889 - 964499 | 58071.3 |
| peptidylprolyl isomerase | SHEWBE_RS04455 | Not Available | + | 965253 - 965747 | 18126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
