Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | SHEWBE_RS04315 | Not Available | + | 930684 - 934391 | 140854.0 |
| zinc-dependent metalloprotease | SHEWBE_RS04320 | Not Available | + | 934609 - 937020 | 88900.5 |
| hypothetical protein | SHEWBE_RS04325 | Not Available | + | 937516 - 937818 | 10799.5 |
| hypothetical protein | SHEWBE_RS04335 | Not Available | - | 938014 - 938391 | 13567.6 |
| efflux rnd transporter permease subunit | SHEWBE_RS04340 | Not Available | - | 938665 - 941739 | 112891.0 |
| efflux rnd transporter periplasmic adaptor subunit | SHEWBE_RS04345 | Not Available | - | 941806 - 942885 | 39252.4 |
| lysr family transcriptional regulator | SHEWBE_RS04350 | Not Available | + | 943089 - 944033 | 35470.9 |
| qnr family pentapeptide repeat protein | SHEWBE_RS04355 | Not Available | - | 944192 - 944857 | 24750.1 |
| mate family efflux transporter | SHEWBE_RS04360 | Not Available | - | 945141 - 946523 | 49581.8 |
| co-chaperone groes | SHEWBE_RS04365 | Not Available | + | 946750 - 947040 | 10192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
