Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter solute-binding protein, zn/mn family | SHEWBE_RS04265 | Not Available | + | 917706 - 918620 | 33049.8 |
| metal abc transporter permease | SHEWBE_RS04270 | Not Available | + | 918698 - 919489 | 28035.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SHEWBE_RS04275 | Not Available | + | 919658 - 920383 | 26936.7 |
| ribonuclease e inhibitor rrab | SHEWBE_RS04280 | Not Available | + | 920547 - 920957 | 15348.5 |
| ggdef domain-containing protein | SHEWBE_RS04285 | Not Available | - | 921072 - 922040 | 37035.4 |
| response regulator | SHEWBE_RS04290 | Not Available | - | 922054 - 923049 | 35980.6 |
| crotonase/enoyl-coa hydratase family protein | SHEWBE_RS04295 | Not Available | + | 923300 - 924106 | 29283.9 |
| duf3530 family protein | SHEWBE_RS04300 | Not Available | - | 924130 - 925068 | 34093.0 |
| rna polymerase-associated protein rapa | SHEWBE_RS04305 | Not Available | - | 925562 - 928468 | 109130.0 |
| phoh family protein | SHEWBE_RS04310 | Not Available | + | 928878 - 930272 | 52302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
