Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | SHEWBE_RS04225 | Not Available | - | 909701 - 910012 | 11782.0 |
| trab/gumn family protein | SHEWBE_RS04230 | Not Available | + | 910069 - 910950 | 32613.1 |
| chemoreceptor glutamine deamidase ched | SHEWBE_RS04235 | Not Available | + | 911128 - 911754 | 23607.7 |
| maoc/paaz c-terminal domain-containing protein | SHEWBE_RS04240 | Not Available | + | 911892 - 912725 | 31653.2 |
| formate--tetrahydrofolate ligase | SHEWBE_RS04245 | Not Available | + | 913096 - 914808 | 60270.1 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20340 | Not Available | - | 914876 - 915064 | 7288.84 |
| hypothetical protein | SHEWBE_RS04255 | Not Available | + | 915167 - 915502 | 12345.1 |
| hypothetical protein | SHEWBE_RS20760 | Not Available | - | 915537 - 915662 | 4745.85 |
| abc-type zinc uptake system zinc chaperone | SHEWBE_RS19940 | Not Available | + | 915994 - 916278 | 10399.8 |
| hypothetical protein | SHEWBE_RS04260 | Not Available | + | 916517 - 917722 | 44869.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
