Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arsj-associated glyceraldehyde-3-phosphate dehydrogenase | SHEWBE_RS04175 | Not Available | + | 900533 - 901555 | 37189.5 |
| organoarsenical effux mfs transporter arsj | SHEWBE_RS04180 | Not Available | + | 901698 - 902945 | 44800.8 |
| tyrosine-type recombinase/integrase | SHEWBE_RS04185 | Not Available | - | 903353 - 903529 | 6278.72 |
| tyrosine-type recombinase/integrase | SHEWBE_RS04190 | Not Available | + | 903926 - 904045 | 4731.43 |
| alanine/glycine:cation symporter family protein | SHEWBE_RS04195 | Not Available | + | 904463 - 905839 | 48062.7 |
| hu family dna-binding protein | SHEWBE_RS04200 | Not Available | - | 906247 - 906522 | 9767.73 |
| hypothetical protein | SHEWBE_RS04205 | Not Available | - | 906738 - 907139 | 14366.2 |
| duf4240 domain-containing protein | SHEWBE_RS04210 | Not Available | + | 907378 - 907887 | 19820.5 |
| hypothetical protein | SHEWBE_RS04215 | Not Available | - | 908359 - 908640 | 10281.0 |
| duf3016 domain-containing protein | SHEWBE_RS04220 | Not Available | + | 909068 - 909604 | 19951.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
