Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | SHEWBE_RS04125 | Not Available | + | 887445 - 888896 | 51724.6 |
| tolc family protein | SHEWBE_RS04130 | Not Available | + | 889023 - 890438 | 52003.3 |
| hlyd family secretion protein | SHEWBE_RS04135 | Not Available | + | 890428 - 891399 | 35650.9 |
| abc transporter permease | SHEWBE_RS04140 | Not Available | + | 891413 - 892612 | 44200.7 |
| abc transporter permease | SHEWBE_RS04145 | Not Available | + | 892627 - 893775 | 42081.3 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20335 | Not Available | + | 894330 - 894476 | 5606.93 |
| ig-like domain-containing protein | SHEWBE_RS04155 | Not Available | - | 894638 - 897184 | 87978.4 |
| ribosome biogenesis factor yjga | SHEWBE_RS04160 | Not Available | - | 897261 - 897800 | 20873.1 |
| metalloprotease pmba | SHEWBE_RS04165 | Not Available | + | 897941 - 899281 | 47693.3 |
| metalloregulator arsr/smtb family transcription factor | SHEWBE_RS04170 | Not Available | + | 899978 - 900325 | 13297.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
