Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS03930 | Not Available | + | 838058 - 838337 | 10391.6 |
| patatin-like phospholipase family protein | SHEWBE_RS03935 | Not Available | + | 838424 - 840646 | 82013.3 |
| m13 family metallopeptidase | SHEWBE_RS03940 | Not Available | + | 840782 - 842836 | 77024.4 |
| hypothetical protein | SHEWBE_RS19935 | Not Available | - | 842966 - 843124 | 6182.26 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SHEWBE_RS03945 | Not Available | + | 843542 - 846142 | 93783.0 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | SHEWBE_RS03950 | Not Available | - | 846300 - 846695 | 14913.9 |
| atp-dependent protease atpase subunit hslu | SHEWBE_RS03955 | Not Available | - | 846789 - 848114 | 49895.2 |
| atp-dependent protease subunit hslv | SHEWBE_RS03960 | Not Available | - | 848192 - 848716 | 18802.7 |
| spor domain-containing protein | SHEWBE_RS03965 | Not Available | - | 849014 - 849601 | 22154.9 |
| arginine--trna ligase | SHEWBE_RS03970 | Not Available | - | 849622 - 851367 | 65053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
