Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SHEWBE_RS20870 | Not Available | - | 825930 - 826352 | 14185.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | SHEWBE_RS03885 | Not Available | - | 827137 - 828054 | 33128.7 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | SHEWBE_RS03890 | Not Available | + | 828274 - 828861 | 21702.8 |
| beta-lactamase regulator ampe | SHEWBE_RS03895 | Not Available | + | 828861 - 829712 | 31275.5 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | SHEWBE_RS03900 | Not Available | + | 829840 - 830592 | 28441.3 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | SHEWBE_RS03905 | Not Available | + | 830705 - 833365 | 99346.0 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | SHEWBE_RS03910 | Not Available | + | 833379 - 835256 | 65563.7 |
| dihydrolipoyl dehydrogenase | SHEWBE_RS03915 | Not Available | + | 835680 - 837110 | 50703.5 |
| hypothetical protein | SHEWBE_RS03920 | Not Available | + | 837142 - 837459 | 11825.2 |
| hypothetical protein | SHEWBE_RS03925 | Not Available | + | 837486 - 837971 | 18493.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
