Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SHEWBE_RS03825 | Not Available | + | 816759 - 817604 | 30702.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 817856 - 818215 | Not Available |
| lysr substrate-binding domain-containing protein | SHEWBE_RS03840 | Not Available | - | 818449 - 819318 | 32662.3 |
| 8-oxo-dgtp diphosphatase mutt | SHEWBE_RS03845 | Not Available | - | 819441 - 819866 | 15804.8 |
| dna gyrase inhibitor yacg | SHEWBE_RS03850 | Not Available | - | 819872 - 820084 | 8145.44 |
| cell division protein zapd | SHEWBE_RS03855 | Not Available | - | 820190 - 820924 | 28848.7 |
| dephospho-coa kinase | SHEWBE_RS03860 | Not Available | - | 820933 - 821538 | 22291.9 |
| prepilin peptidase | SHEWBE_RS03865 | Not Available | - | 821851 - 822762 | 33518.7 |
| type ii secretion system f family protein | SHEWBE_RS03870 | Not Available | - | 822822 - 824093 | 45839.9 |
| type iv-a pilus assembly atpase pilb | SHEWBE_RS03875 | Not Available | - | 824135 - 825841 | 62936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
