Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS03775 | Not Available | - | 807177 - 807530 | 12406.5 |
| ribulose-phosphate 3-epimerase | SHEWBE_RS03780 | Not Available | + | 807740 - 808414 | 24334.6 |
| phosphoglycolate phosphatase | SHEWBE_RS03785 | Not Available | + | 808418 - 809125 | 26125.2 |
| tryptophan--trna ligase | SHEWBE_RS03790 | Not Available | + | 809122 - 810129 | 37392.4 |
| lysr substrate-binding domain-containing protein | SHEWBE_RS03795 | Not Available | - | 810181 - 811056 | 33365.9 |
| dmt family transporter | SHEWBE_RS03800 | Not Available | + | 811184 - 812089 | 33269.4 |
| bon domain-containing protein | SHEWBE_RS03805 | Not Available | - | 813086 - 813655 | 20676.4 |
| phosphoheptose isomerase | SHEWBE_RS03810 | Not Available | - | 813741 - 814331 | 21001.2 |
| yran family protein | SHEWBE_RS03815 | Not Available | - | 814413 - 814763 | 13712.8 |
| penicillin-binding protein activator | SHEWBE_RS03820 | Not Available | - | 814776 - 816671 | 70132.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
