Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cina family nicotinamide mononucleotide deamidase-related protein | SHEWBE_RS03675 | Not Available | + | 783330 - 784604 | 45772.4 |
| duf1439 domain-containing protein | SHEWBE_RS03680 | Not Available | - | 784685 - 785218 | 20349.7 |
| phosphoenolpyruvate carboxylase | SHEWBE_RS03685 | Not Available | - | 785218 - 787851 | 98852.1 |
| acetylornithine deacetylase | SHEWBE_RS03690 | Not Available | - | 788119 - 789270 | 41853.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SHEWBE_RS03695 | Not Available | + | 789534 - 790514 | 35223.1 |
| acetylglutamate kinase | SHEWBE_RS03700 | Not Available | + | 790538 - 791323 | 27130.4 |
| ornithine carbamoyltransferase | SHEWBE_RS03705 | Not Available | + | 791428 - 792336 | 32668.2 |
| argininosuccinate synthase | SHEWBE_RS03710 | Not Available | + | 792393 - 793616 | 44568.1 |
| argininosuccinate lyase | SHEWBE_RS03715 | Not Available | + | 793688 - 795052 | 49778.9 |
| penicillin-binding protein 1a | SHEWBE_RS03720 | Not Available | - | 795191 - 797719 | 93058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
