Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | SHEWBE_RS03580 | Not Available | + | 758742 - 760532 | 66565.2 |
| mdr family oxidoreductase | SHEWBE_RS03585 | Not Available | + | 760634 - 761614 | 34606.9 |
| lysr substrate-binding domain-containing protein | SHEWBE_RS20320 | Not Available | - | 761676 - 761975 | 11493.1 |
| hypothetical protein | SHEWBE_RS20325 | Not Available | - | 761959 - 762159 | 7621.25 |
| hypothetical protein | SHEWBE_RS03595 | Not Available | + | 762492 - 762779 | 10915.9 |
| atp-binding protein | SHEWBE_RS03600 | Not Available | - | 763021 - 764400 | 51636.6 |
| response regulator | SHEWBE_RS03605 | Not Available | - | 764400 - 765083 | 25884.6 |
| spy/cpxp family protein refolding chaperone | SHEWBE_RS03610 | Not Available | + | 765331 - 765819 | 18784.8 |
| cation diffusion facilitator family transporter | SHEWBE_RS03615 | Not Available | + | 765929 - 766798 | 31636.3 |
| 16s ribosomal rna | Not Available | Not Available | + | 767517 - 769071 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
