Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_00657 | SHEWBE_RS03530 | Not Available | + | 747756 - 748349 | Not Available |
| hypothetical protein | SHEWBE_RS03535 | Not Available | + | 748497 - 748859 | 13933.5 |
| m16 family metallopeptidase | SHEWBE_RS03540 | Not Available | + | 749006 - 750334 | 49330.8 |
| m16 family metallopeptidase | SHEWBE_RS03545 | Not Available | + | 750331 - 751776 | 52110.1 |
| hypothetical protein | SHEWBE_RS03550 | Not Available | + | 751888 - 752373 | 18699.0 |
| trna (cytidine(34)-2'-o)-methyltransferase | SHEWBE_RS03555 | Not Available | - | 752381 - 752845 | 17105.8 |
| lysr family transcriptional regulator | SHEWBE_RS03560 | Not Available | + | 753388 - 754320 | 34519.8 |
| yjjw family glycine radical enzyme activase | SHEWBE_RS03565 | Not Available | - | 754326 - 755198 | 31994.5 |
| yjji family glycine radical enzyme | SHEWBE_RS03570 | Not Available | - | 755228 - 756760 | 56597.5 |
| aldehyde dehydrogenase family protein | SHEWBE_RS03575 | Not Available | - | 756921 - 758441 | 55454.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
