Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | SHEWBE_RS03480 | Not Available | - | 737539 - 738321 | 29083.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | SHEWBE_RS03485 | Not Available | - | 738315 - 740030 | 62991.9 |
| hypothetical protein | SHEWBE_RS19930 | Not Available | + | 740256 - 740426 | 6336.23 |
| terb family tellurite resistance protein | SHEWBE_RS03490 | Not Available | - | 740720 - 741166 | 16975.6 |
| hypothetical protein | SHEWBE_RS03495 | Not Available | + | 741383 - 742099 | 26103.0 |
| duf4145 domain-containing protein | SHEWBE_RS03500 | Not Available | + | 742169 - 743587 | 51884.9 |
| hypothetical protein | SHEWBE_RS03510 | Not Available | + | 744299 - 744544 | 9235.14 |
| hypothetical protein | SHEWBE_RS03515 | Not Available | - | 744584 - 744952 | 13713.5 |
| tyrosine-type recombinase/integrase | SHEWBE_RS03520 | Not Available | - | 745161 - 745959 | 27403.1 |
| multidrug effflux mfs transporter | SHEWBE_RS03525 | Not Available | + | 746067 - 747269 | 43463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
