Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS03380 | Not Available | + | 719175 - 719508 | 11813.5 |
| tyrosine-type recombinase/integrase | SHEWBE_RS03385 | Not Available | + | 719501 - 719773 | 9903.35 |
| ggdef domain-containing protein | SHEWBE_RS20310 | Not Available | - | 719696 - 720028 | 12561.5 |
| hypothetical protein | SHEWBE_RS20315 | Not Available | - | 720175 - 720324 | 5501.74 |
| efflux rnd transporter permease subunit | SHEWBE_RS03400 | Not Available | - | 720551 - 723682 | 114749.0 |
| hypothetical protein | SHEWBE_RS19925 | Not Available | - | 723675 - 723839 | 5905.3 |
| efflux rnd transporter periplasmic adaptor subunit | SHEWBE_RS03405 | Not Available | - | 723852 - 725372 | 56164.4 |
| heavy metal-binding domain-containing protein | SHEWBE_RS03410 | Not Available | - | 725395 - 725808 | 14658.5 |
| hypothetical protein | SHEWBE_RS03415 | Not Available | - | 726069 - 726509 | 15939.1 |
| duf2057 family protein | SHEWBE_RS03420 | Not Available | - | 726724 - 727155 | 15747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
