Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2909 domain-containing protein | SHEWBE_RS03335 | Not Available | + | 708351 - 708569 | 8039.5 |
| cytochrome c oxidase subunit 3 | SHEWBE_RS03340 | Not Available | - | 708671 - 709546 | 32607.2 |
| cytochrome c oxidase assembly protein | SHEWBE_RS03345 | Not Available | - | 709543 - 710112 | 21015.3 |
| cytochrome c oxidase subunit i | SHEWBE_RS03350 | Not Available | - | 710115 - 711743 | 60927.4 |
| tyrosine-type recombinase/integrase | SHEWBE_RS03355 | Not Available | - | 711762 - 712874 | 41115.7 |
| cell division inhibitor sula | SHEWBE_RS03360 | Not Available | - | 713306 - 713818 | 18837.6 |
| transcriptional repressor lexa | SHEWBE_RS03365 | Not Available | - | 713851 - 714468 | 22473.3 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | SHEWBE_RS03370 | Not Available | + | 714775 - 717198 | 92080.7 |
| tryptophan permease | SHEWBE_RS03375 | Not Available | + | 717198 - 718454 | 44341.3 |
| hypothetical protein | SHEWBE_RS19920 | Not Available | - | 718661 - 718798 | 5210.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
