Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SHEWBE_RS20300 | Not Available | - | 696448 - 700056 | 131703.0 |
| chemotaxis protein chew | SHEWBE_RS03290 | Not Available | - | 700074 - 700646 | 21066.2 |
| chemotaxis protein chea | SHEWBE_RS03295 | Not Available | - | 700757 - 702856 | 77691.6 |
| response regulator | SHEWBE_RS03300 | Not Available | - | 702897 - 703259 | 13213.2 |
| stas domain-containing protein | SHEWBE_RS03305 | Not Available | - | 703262 - 703570 | 11551.9 |
| sco family protein | SHEWBE_RS03310 | Not Available | - | 703928 - 704620 | 25095.4 |
| heme o synthase | SHEWBE_RS03315 | Not Available | - | 704687 - 705601 | 33530.6 |
| cox15/ctaa family protein | SHEWBE_RS03320 | Not Available | - | 705699 - 706688 | 36151.5 |
| hypothetical protein | SHEWBE_RS03325 | Not Available | - | 706688 - 707233 | 20158.0 |
| surf1 family protein | SHEWBE_RS03330 | Not Available | - | 707460 - 708218 | 28364.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
