Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS03190 | Not Available | + | 676250 - 676345 | 3449.18 |
| tyrosine-type recombinase/integrase | SHEWBE_RS03195 | Not Available | + | 676405 - 676500 | 3449.18 |
| tyrosine-type recombinase/integrase | SHEWBE_RS03200 | Not Available | + | 676560 - 676655 | 3449.18 |
| peroxiredoxin | SHEWBE_RS03205 | Not Available | + | 676729 - 677205 | 16747.2 |
| hypothetical protein | SHEWBE_RS03210 | Not Available | - | 677277 - 677990 | 28120.2 |
| hypothetical protein | SHEWBE_RS19825 | Not Available | - | 678202 - 678393 | 7150.5 |
| two-component system sensor histidine kinase envz | SHEWBE_RS03215 | Not Available | - | 678386 - 679696 | 48897.0 |
| two-component system response regulator ompr | SHEWBE_RS03220 | Not Available | - | 679761 - 680486 | 27555.3 |
| transcription elongation factor greb | SHEWBE_RS03225 | Not Available | + | 681004 - 681489 | 18783.5 |
| tex family protein | SHEWBE_RS03230 | Not Available | + | 681546 - 683876 | 85030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
