Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase menf | SHEWBE_RS03090 | Not Available | - | 648733 - 650079 | 51020.7 |
| hd-gyp domain-containing protein | SHEWBE_RS03095 | Not Available | + | 650638 - 651816 | 43656.8 |
| yeih family protein | SHEWBE_RS03100 | Not Available | - | 652720 - 653676 | 33512.1 |
| glutathione-disulfide reductase | SHEWBE_RS03105 | Not Available | - | 653900 - 655255 | 48395.0 |
| hypothetical protein | SHEWBE_RS03110 | Not Available | - | 655396 - 655935 | 20268.4 |
| hypothetical protein | SHEWBE_RS03115 | Not Available | - | 656138 - 656914 | 28855.3 |
| oligopeptidase a | SHEWBE_RS03120 | Not Available | + | 657451 - 659493 | 76974.8 |
| thioesterase family protein | SHEWBE_RS03125 | Not Available | + | 659788 - 660339 | 21927.2 |
| glutathione s-transferase family protein | SHEWBE_RS03130 | Not Available | - | 660349 - 660999 | 25611.7 |
| dna-3-methyladenine glycosylase i | SHEWBE_RS03135 | Not Available | + | 661600 - 662298 | 26098.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
