Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 9 protein | SHEWBE_RS02990 | Not Available | + | 626349 - 627392 | 37925.1 |
| hypothetical protein | SHEWBE_RS02995 | Not Available | + | 627566 - 628582 | 37689.1 |
| cdp-glycerol glycerophosphotransferase family protein | SHEWBE_RS03000 | Not Available | + | 628708 - 629772 | 40377.0 |
| glycosyltransferase family 52 | SHEWBE_RS03005 | Not Available | + | 629775 - 630767 | 38555.6 |
| cytidylyltransferase domain-containing protein | SHEWBE_RS03010 | Not Available | + | 630867 - 631592 | 26870.1 |
| n-acetylneuraminate synthase family protein | SHEWBE_RS03015 | Not Available | + | 631585 - 632628 | 38006.7 |
| udp-n-acetylglucosamine 2-epimerase | SHEWBE_RS03020 | Not Available | + | 632625 - 633752 | 41656.1 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | SHEWBE_RS03025 | Not Available | + | 633962 - 635392 | 50781.4 |
| pantetheine-phosphate adenylyltransferase | SHEWBE_RS03030 | Not Available | + | 635395 - 635874 | 17541.1 |
| capsule assembly wzi family protein | SHEWBE_RS03035 | Not Available | + | 635881 - 637374 | 55330.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
