Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase glpe | SHEWBE_RS02945 | Not Available | - | 617407 - 617715 | 11149.8 |
| l-threonine 3-dehydrogenase | SHEWBE_RS02950 | Not Available | - | 618077 - 619102 | 37351.3 |
| glycine c-acetyltransferase | SHEWBE_RS02955 | Not Available | - | 619103 - 620296 | 43338.0 |
| tetr/acrr family transcriptional regulator | SHEWBE_RS02960 | Not Available | - | 620596 - 621252 | 25342.5 |
| hypothetical protein | SHEWBE_RS20755 | Not Available | + | 621384 - 621518 | 4635.7 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | SHEWBE_RS02965 | Not Available | + | 621564 - 622829 | 45613.1 |
| 3-deoxy-d-manno-octulosonic acid kinase | SHEWBE_RS02970 | Not Available | - | 622826 - 623608 | 29405.1 |
| dtdp-4-dehydrorhamnose reductase | SHEWBE_RS02975 | Not Available | - | 623691 - 624557 | 31434.6 |
| dtdp-glucose 4,6-dehydratase | SHEWBE_RS02980 | Not Available | - | 624554 - 625615 | 39581.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SHEWBE_RS02985 | Not Available | - | 625618 - 626163 | 20430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
