Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 590431 - 590546 | Not Available |
| hypothetical protein | SHEWBE_RS02840 | Not Available | - | 590933 - 591151 | 8106.73 |
| is630 family transposase | SHEWBE_RS02845 | Not Available | + | 591283 - 592318 | 39552.1 |
| 16s ribosomal rna | Not Available | Not Available | + | 593649 - 595203 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 595714 - 598644 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 598909 - 599024 | Not Available |
| hypothetical protein | SHEWBE_RS02870 | Not Available | - | 599411 - 599629 | 8106.73 |
| is630 family transposase | SHEWBE_RS02875 | Not Available | + | 599761 - 600249 | 18644.3 |
| tyrosine-type recombinase/integrase | SHEWBE_RS02880 | Not Available | + | 600719 - 601177 | 17532.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SHEWBE_RS02885 | Not Available | + | 601512 - 603854 | 87748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
