Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | SHEWBE_RS02780 | Not Available | + | 578607 - 579626 | 36999.5 |
| duf494 family protein | SHEWBE_RS02785 | Not Available | + | 579629 - 580102 | 18602.4 |
| type i dna topoisomerase | SHEWBE_RS02790 | Not Available | + | 580430 - 580993 | 20912.9 |
| l-threonylcarbamoyladenylate synthase | SHEWBE_RS02795 | Not Available | + | 581024 - 581581 | 19749.7 |
| oxygen-dependent coproporphyrinogen oxidase | SHEWBE_RS02800 | Not Available | + | 581639 - 582559 | 34765.8 |
| shikimate dehydrogenase | SHEWBE_RS02810 | Not Available | + | 582873 - 583697 | 29415.1 |
| duf1488 domain-containing protein | SHEWBE_RS02815 | Not Available | + | 583694 - 583957 | 9856.55 |
| gamma carbonic anhydrase family protein | SHEWBE_RS02820 | Not Available | - | 584023 - 584577 | 19720.8 |
| 16s ribosomal rna | Not Available | Not Available | + | 585232 - 586786 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 587297 - 590227 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
