Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS02725 | Not Available | + | 566427 - 566744 | 11651.3 |
| hypothetical protein | SHEWBE_RS02730 | Not Available | + | 567018 - 567638 | 23554.0 |
| hypothetical protein | SHEWBE_RS02740 | Not Available | + | 568773 - 569366 | 21303.4 |
| transposase | SHEWBE_RS02745 | Not Available | + | 569561 - 570538 | 37540.1 |
| tyrosine-type recombinase/integrase | SHEWBE_RS02750 | Not Available | - | 571396 - 572837 | 53335.7 |
| trk system potassium transporter trka | SHEWBE_RS02755 | Not Available | - | 572940 - 574349 | 51737.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SHEWBE_RS02760 | Not Available | - | 574359 - 575636 | 47446.8 |
| methionyl-trna formyltransferase | SHEWBE_RS02765 | Not Available | - | 575636 - 576595 | 34706.6 |
| peptide deformylase | SHEWBE_RS02770 | Not Available | - | 576603 - 577115 | 19485.4 |
| lysm peptidoglycan-binding domain-containing protein | SHEWBE_RS02775 | Not Available | + | 577297 - 578397 | 40744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
