Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS20295 | Not Available | + | 560113 - 560211 | 3735.15 |
| arsr/smtb family transcription factor | SHEWBE_RS02685 | Not Available | - | 560322 - 560627 | 11342.8 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SHEWBE_RS02690 | Not Available | + | 560825 - 561364 | 20361.3 |
| hypothetical protein | SHEWBE_RS19820 | Not Available | - | 561456 - 561671 | 8141.44 |
| hypothetical protein | SHEWBE_RS02695 | Not Available | + | 562270 - 562668 | 14632.5 |
| hypothetical protein | SHEWBE_RS02700 | Not Available | + | 562703 - 562933 | 8887.12 |
| hypothetical protein | SHEWBE_RS02705 | Not Available | + | 562961 - 563209 | 9652.51 |
| is66 family insertion sequence element accessory protein tnpa | SHEWBE_RS02710 | Not Available | + | 564020 - 564343 | 11770.4 |
| is66 family insertion sequence element accessory protein tnpb | SHEWBE_RS02715 | Not Available | + | 564337 - 564684 | 13523.3 |
| is66 family transposase | SHEWBE_RS02720 | Not Available | + | 564768 - 566330 | 59030.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
