Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS02610 | Not Available | + | 548486 - 549544 | 38472.9 |
| lpp20 family lipoprotein | SHEWBE_RS02615 | Not Available | + | 549554 - 550150 | 21489.6 |
| transglycosylase slt domain-containing protein | SHEWBE_RS02620 | Not Available | + | 550200 - 551570 | 51609.1 |
| acetyl-coa c-acyltransferase fada | SHEWBE_RS02625 | Not Available | - | 551627 - 552790 | 41082.9 |
| fatty acid oxidation complex subunit alpha fadb | SHEWBE_RS02630 | Not Available | - | 552809 - 554962 | 77408.1 |
| xaa-pro dipeptidase | SHEWBE_RS02635 | Not Available | + | 555197 - 556516 | 49819.5 |
| yigz family protein | SHEWBE_RS02640 | Not Available | + | 556516 - 557133 | 22460.8 |
| trkh family potassium uptake protein | SHEWBE_RS02645 | Not Available | + | 557300 - 558757 | 53320.4 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SHEWBE_RS02650 | Not Available | + | 558885 - 559412 | 20036.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20280 | Not Available | + | 559700 - 559798 | 3735.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
