Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | SHEWBE_RS02560 | Not Available | - | 537392 - 539461 | 75470.1 |
| glycine--trna ligase subunit alpha | SHEWBE_RS02565 | Not Available | - | 539473 - 540378 | 34391.8 |
| dna-3-methyladenine glycosylase i | SHEWBE_RS02570 | Not Available | + | 540559 - 541152 | 22311.5 |
| amidohydrolase family protein | SHEWBE_RS02575 | Not Available | - | 541513 - 544752 | 120035.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20265 | Not Available | - | 545133 - 545298 | 6466.9 |
| sulfurtransferase tusa | SHEWBE_RS02585 | Not Available | - | 545335 - 545568 | 8711.6 |
| cys-trna(pro) deacylase | SHEWBE_RS02590 | Not Available | - | 545735 - 546202 | 16666.4 |
| hypothetical protein | SHEWBE_RS02595 | Not Available | - | 546199 - 546456 | 9848.93 |
| etec_3214 domain-containing protein | SHEWBE_RS02600 | Not Available | + | 546778 - 547467 | 25866.5 |
| lpp20 family lipoprotein | SHEWBE_RS02605 | Not Available | + | 547483 - 548454 | 35775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
