Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | SHEWBE_RS02505 | Not Available | - | 526543 - 526800 | 9626.94 |
| ribonuclease p protein component | SHEWBE_RS02510 | Not Available | - | 526767 - 527123 | 13781.0 |
| 50s ribosomal protein l34 | SHEWBE_RS02515 | Not Available | - | 527138 - 527275 | 5153.46 |
| chromosomal replication initiator protein dnaa | SHEWBE_RS02520 | Not Available | + | 527724 - 529112 | 52426.8 |
| dna polymerase iii subunit beta | SHEWBE_RS02525 | Not Available | + | 529132 - 530232 | 41016.4 |
| dna replication/repair protein recf | SHEWBE_RS02530 | Not Available | + | 530432 - 531529 | 41353.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SHEWBE_RS02535 | Not Available | + | 531531 - 533951 | 90386.7 |
| 5-oxoprolinase subunit pxpa | SHEWBE_RS02540 | Not Available | - | 534527 - 535273 | 26402.0 |
| biotin-dependent carboxyltransferase family protein | SHEWBE_RS02545 | Not Available | - | 535300 - 536259 | 34975.8 |
| 5-oxoprolinase subunit pxpb | SHEWBE_RS02550 | Not Available | - | 536256 - 537038 | 28486.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
