Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme-copper oxidase subunit iii family protein | SHEWBE_RS02410 | Not Available | + | 499383 - 500075 | 25916.9 |
| cytochrome c oxidase subunit iv family protein | SHEWBE_RS02415 | Not Available | + | 500281 - 500640 | 13777.6 |
| sco family protein | SHEWBE_RS02420 | Not Available | + | 500676 - 501359 | 25694.1 |
| methyl-accepting chemotaxis protein | SHEWBE_RS02425 | Not Available | - | 501412 - 502815 | 50953.5 |
| nucleoside hydrolase | SHEWBE_RS02430 | Not Available | + | 503159 - 504130 | 35287.9 |
| lyse family translocator | SHEWBE_RS02440 | Not Available | - | 504365 - 505009 | 23158.7 |
| hypothetical protein | SHEWBE_RS19915 | Not Available | + | 505557 - 505724 | 6365.51 |
| duf1186 domain-containing protein | SHEWBE_RS02445 | Not Available | + | 505896 - 506837 | 35083.5 |
| duf3427 domain-containing protein | SHEWBE_RS02450 | Not Available | - | 507226 - 510387 | 121026.0 |
| hypothetical protein | SHEWBE_RS19815 | Not Available | - | 510878 - 511066 | 6839.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
