Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit i | SHEWBE_RS02360 | Not Available | - | 488158 - 488541 | 14161.4 |
| parb/repb/spo0j family partition protein | SHEWBE_RS02365 | Not Available | - | 488766 - 489650 | 32595.9 |
| para family protein | SHEWBE_RS02370 | Not Available | - | 489666 - 490454 | 28665.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | SHEWBE_RS02375 | Not Available | - | 490545 - 491165 | 23384.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | SHEWBE_RS02380 | Not Available | - | 491285 - 493177 | 69756.7 |
| fmn-binding protein mioc | SHEWBE_RS02385 | Not Available | - | 493636 - 494076 | 16057.0 |
| nad/fad-utilizing enzyme | SHEWBE_RS02390 | Not Available | + | 494595 - 495152 | 21013.2 |
| c-type cytochrome | SHEWBE_RS02395 | Not Available | + | 495389 - 496846 | 54130.1 |
| cbb3-type cytochrome c oxidase subunit i | SHEWBE_RS02400 | Not Available | + | 496843 - 498597 | 65104.9 |
| heme-copper oxidase subunit iii | SHEWBE_RS02405 | Not Available | + | 498597 - 499289 | 26332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
