Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 467014 - 468568 | Not Available |
| cytochrome c oxidase accessory protein ccog | SHEWBE_RS02260 | Not Available | - | 469296 - 470729 | 54898.9 |
| hypothetical protein | SHEWBE_RS02265 | Not Available | + | 470817 - 471170 | 13296.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SHEWBE_RS02270 | Not Available | + | 471316 - 472221 | 33718.8 |
| duf2061 domain-containing protein | SHEWBE_RS02275 | Not Available | + | 472437 - 472631 | 7164.81 |
| tyrosine-type recombinase/integrase | SHEWBE_RS02280 | Not Available | + | 472825 - 473088 | 9382.75 |
| hypothetical protein | SHEWBE_RS02285 | Not Available | + | 473239 - 473541 | 11152.3 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | SHEWBE_RS02290 | Not Available | - | 473672 - 475501 | 66426.5 |
| deor/glpr family dna-binding transcription regulator | SHEWBE_RS02295 | Not Available | - | 475554 - 476324 | 28167.8 |
| tonb-dependent siderophore receptor | SHEWBE_RS02300 | Not Available | - | 476520 - 478679 | 80243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
