Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | SHEWBE_RS02200 | Not Available | - | 455763 - 456197 | 15798.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SHEWBE_RS02205 | Not Available | + | 456439 - 457983 | 56378.6 |
| murein hydrolase activator envc family protein | SHEWBE_RS02210 | Not Available | + | 458042 - 459127 | 40208.5 |
| s41 family peptidase | SHEWBE_RS02215 | Not Available | + | 459160 - 460380 | 44725.2 |
| divergent polysaccharide deacetylase family protein | SHEWBE_RS02220 | Not Available | + | 460426 - 461196 | 28575.8 |
| rrf2 family transcriptional regulator | SHEWBE_RS02225 | Not Available | - | 461224 - 461682 | 17070.9 |
| ykgj family cysteine cluster protein | SHEWBE_RS02230 | Not Available | - | 461704 - 461955 | 8761.64 |
| Trna-asp | Not Available | Not Available | + | 462990 - 463066 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 463171 - 463286 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 463578 - 466508 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
