Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SHEWBE_RS02140 | Not Available | - | 442965 - 443435 | 17791.5 |
| methyl-accepting chemotaxis protein | SHEWBE_RS02150 | Not Available | - | 443965 - 445623 | 60217.4 |
| molybdopterin adenylyltransferase | SHEWBE_RS02155 | Not Available | - | 445839 - 446372 | 19269.3 |
| tyrosine-type recombinase/integrase | SHEWBE_RS02160 | Not Available | - | 446607 - 446726 | 4430.3 |
| is4 family transposase | SHEWBE_RS02165 | Not Available | + | 447187 - 448455 | 48433.9 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20260 | Not Available | - | 448706 - 448971 | 8944.25 |
| chase3 domain-containing protein | SHEWBE_RS02175 | Not Available | - | 449150 - 451288 | 77505.4 |
| nad(p)/fad-dependent oxidoreductase | SHEWBE_RS02185 | Not Available | - | 452480 - 453664 | 42899.6 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SHEWBE_RS02190 | Not Available | - | 453992 - 455011 | 36129.6 |
| protein-export chaperone secb | SHEWBE_RS02195 | Not Available | - | 455116 - 455658 | 19738.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
