Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS20250 | Not Available | - | 434141 - 434344 | 7691.38 |
| acireductone synthase | SHEWBE_RS02095 | Not Available | + | 434566 - 435243 | 25153.9 |
| acyl-coa thioesterase | SHEWBE_RS02100 | Not Available | + | 435371 - 435805 | 16372.8 |
| acyl-coa thioesterase | SHEWBE_RS02105 | Not Available | - | 435916 - 436320 | 15007.6 |
| amp-dependent synthetase/ligase | SHEWBE_RS02110 | Not Available | - | 436399 - 438195 | 66706.4 |
| gntr family transcriptional regulator | SHEWBE_RS02115 | Not Available | - | 438531 - 438899 | 13649.6 |
| alpha/beta hydrolase | SHEWBE_RS02120 | Not Available | + | 439092 - 440612 | 54867.0 |
| atp-binding cassette domain-containing protein | SHEWBE_RS02125 | Not Available | + | 440605 - 441339 | 26490.0 |
| hypothetical protein | SHEWBE_RS02130 | Not Available | + | 441336 - 441599 | 9850.66 |
| abc transporter permease | SHEWBE_RS02135 | Not Available | + | 441599 - 442759 | 42278.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
